My usual method is to put one of the chests down on the deck. Loot the junk from one chest to the other. When approaching 400 stone (or 125 items), gate to luna and toss the chest, then run back through the gate. I put all the gold into my Beetle, to not waste trans powder.
As Antique items are worth ZERO clean-up points, if you aren't saving them to unravel, you can do as Zeke suggested, and drop them (and the footwear, and any 50-stone items) on a goat or a convenient monster corpse.
Using these methods (and extra bags, for the TH - using a 5-slot Beetle compared to the fisher's 1-slotter), both my T-hunter and fisher are well over 200k points each from 0, JUST from doing SOS and level 1-5 T-maps over the last 3 months.